LIR-containing proteins in Rattus norvegicus>> EXPORT DATA


S.No.Uniprot IDStartEndLIR Sequence PSSM Score ▲  ▼ Similar LIR MotifsProtein Description Molecular FunctionBiological ProcessCellular Component
901E9PTR3 493 498 EVFDVI 9 FYCO1_HUMAN(1278-1283) AVFDII(4) Protein Drosha (Fragment)
902E9PTR5 16 21 GDYTML 17 Microtubule-associated protein
903E9PTV4 781 786 GDFEDL 15 Atg3_YEAST(268-273) GDWEDL(5) Protein Bms1 ribosome biogenesis
(GO:0042254)		 nucleus
(GO:0005634)
904E9PTW9 371 376 GSYVSL 12 Protein Tle2 nucleus
(GO:0005634)
905E9PTY6 1714 1719 GGFDFL 12 Protein Fry (Fragment)
906E9PTY6 2437 2442 RDFDFL 17 CALR_HUMAN(198-203) DDWDFL(4) Protein Fry (Fragment)
907E9PU01 1706 1711 GGFTEL 11 Protein Chd4 centrosome
(GO:0005813)
908E9PU09 351 356 ADYEKV 15 A-kinase anchor protein 12
909E9PU09 532 537 GEYQHI 12 A-kinase anchor protein 12
910E9PU09 785 790 ESWVSI 19 A-kinase anchor protein 12
911E9PU09 833 838 SEYDAV 13 A-kinase anchor protein 12
912E9PU15 1187 1192 GSYDLV 11 Protein Dicer1
913E9PU38 157 162 GSFQSL 10 Protein Prp15
914F1LM20 3226 3231 ADYLPL 15 Protein Obscn (Fragment)
915F1LM28 2511 2516 KSFDHL 11 Neurofibromin (Fragment) pigmentation
(GO:0043473)
916F1LM36 2432 2437 GMYQSV 10 Transcriptional regulator ATRX (Fragment) chromatin binding
(GO:0003682);
helicase activity
(GO:0004386)
917F1LM37 311 316 KEYLSL 12 Protein Sf1
918F1LM42 803 808 LGYISV 9 Protein Ank2 protein binding
(GO:0005515)		 cytoskeleton
(GO:0005856);
neuron projection
(GO:0043005)
919F1LM42 1556 1561 EEWVIV 20 STBD1_HUMAN(201-206) EEWEMV(4) Protein Ank2 protein binding
(GO:0005515)		 cytoskeleton
(GO:0005856);
neuron projection
(GO:0043005)
920F1LM42 2560 2565 KTFDEL 12 Protein Ank2 protein binding
(GO:0005515)		 cytoskeleton
(GO:0005856);
neuron projection
(GO:0043005)
921F1LM42 3541 3546 FSWTEL 19 BNI3L_HUMAN(34-39) SSWVEL(4) Protein Ank2 protein binding
(GO:0005515)		 cytoskeleton
(GO:0005856);
neuron projection
(GO:0043005)
922F1LM55 437 442 EEWEAL 20 STBD1_HUMAN(201-206) EEWEMV(4);

TBCD5_HUMAN(57-62) KEWEEL(4)		 Protein RGD1309922 spliceosomal complex
(GO:0005681)
923F1LM60 233 238 SDYDDV 16 Protein Arap1
924F1LM72 139 144 KDFLPV 13 Protein Ptprd (Fragment)
925F1LM75 784 789 ASYEKL 12 FUND1_HUMAN(16-21) DSYEVL(4) Ankycorbin (Fragment) mitochondrion
(GO:0005739)
926F1LM96 13 18 PDYEHV 15 Protein Tipinl1 cell cycle
(GO:0007049)		 nucleus
(GO:0005634)
927F1LMC2 2874 2879 PTFITI 11 Xin actin-binding repeat-containing protein 2
928F1LMC2 3042 3047 ESYDAV 12 Xin actin-binding repeat-containing protein 2
929F1LMC2 3209 3214 PTYEDV 11 Xin actin-binding repeat-containing protein 2
930F1LMD9 370 375 GGFLDI 10 Cyclin-G-associated kinase Golgi apparatus
(GO:0005794)
931F1LMH2 1868 1873 PSYDSV 11 Sodium channel protein type 8 subunit alpha (Fragment) neuronal cell body
(GO:0043025)
932F1LMI1 403 408 FSFEEI 13 OPTN_HUMAN(176-181) DSFVEI(4);

RBCC1_HUMAN(700-705) FDFETI(4)		 Protein Bub1b
933F1LMK3 267 272 LSYEAL 11 FUND1_HUMAN(16-21) DSYEVL(4) Protein RGD1562289
934F1LMQ1 1747 1752 DDYDDI 19 Myosin IXA, isoform CRA_a motor activity
(GO:0003774)
935F1LMQ1 2436 2441 LTFEML 12 Atg19_YEAST(410-415) LTWEEL(4) Myosin IXA, isoform CRA_a motor activity
(GO:0003774)
936F1LMU6 499 504 GGWEDI 18 Atg3_YEAST(268-273) GDWEDL(4) Apical endosomal glycoprotein membrane
(GO:0016020)
937F1LMX1 395 400 LDFEPL 14 Myc box-dependent-interacting protein 1 nucleus
(GO:0005634)
938F1LMX4 568 573 ATWTEV 17 Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C cilium
(GO:0005929)
939F1LMY3 1156 1161 DDYDDI 19 Receptor-type tyrosine-protein phosphatase zeta
940F1LN18 558 563 SVFETL 9 Hypoxia up-regulated protein 1
941F1LN69 799 804 ADFVLL 15 Q8MQJ7_DROME(389-394) DDFVLV(4);

ULK2_HUMAN(351-356) DDFVLV(4)		 Misshapen-like kinase 1 (Fragment) Golgi apparatus
(GO:0005794)
942F1LN81 760 765 SGFEPL 12 Protein Atmin
943F1LN91 712 717 PTFEPI 11 Protein Tns3
944F1LNB2 523 528 SDYVEV 17 Phosphatase and actin regulator nucleus
(GO:0005634)
945F1LNC5 652 657 ATFEEV 11 Regulating synaptic membrane exocytosis protein 2
946F1LNE1 290 295 SMWDSL 19 TOX high mobility group box family member 3 chromatin binding
(GO:0003682)
947F1LNE7 346 351 ATYILL 11 Serine/threonine-protein kinase MARK1 (Fragment)
948F1LNI3 941 946 GSYEII 13 Protein F5 blood circulation
(GO:0008015);
cell adhesion
(GO:0007155);
proteolysis
(GO:0006508)		 endoplasmic reticulum
(GO:0005783);
extracellular region
(GO:0005576);
Golgi apparatus
(GO:0005794)
949F1LNJ2 85 90 KGYTLL 11 U5 small nuclear ribonucleoprotein 200 kDa helicase nucleic acid binding
(GO:0003676)
950F1LNK0 1250 1255 GEYDKL 13 Microtubule-associated protein neuronal cell body
(GO:0043025)