iLIR v1.0 WWW Server: RESULTS PAGE

Submitted 1 sequence
>sp|Q8TC07|TBC15_HUMAN TBC1 domain family member 15 OS=Homo sapiens GN=TBC1D15 PE=1 SV=2

{"length":"691","regions":[{
startStyle: "curved", endStyle: "curved",
start: 6, end: 224, text: "Pfam:DUF3548", colour: "#ff8800",
"metadata":{ database: "PFAM", type: "Pfam:DUF3548",
description: "Pfam:DUF3548", start: 6, end: 224}
},
{
startStyle: "curved", endStyle: "curved",
start: 343, end: 581, text: "TBC", colour: "#ff8800",
"metadata":{ database: "SMART", type: "TBC",
description: "TBC", start: 343, end: 581}
},
{
startStyle: "straight", endStyle: "straight",
start: 96, end: 101, text: "xLIR", colour: "#ff00ff",
lineStyle: "bold", v_align: "top", label: "xLIR",
"metadata":{ database: "xLIR web server", type: "xLIR-motif",
description: "xLIR-motif:AEWDMV", start: 96, end: 101}
},
{
startStyle: "straight", endStyle: "straight",
start: 295, end: 300, text: "xLIR", colour: "#ff00ff",
lineStyle: "bold", v_align: "top", label: "xLIR",
"metadata":{ database: "xLIR web server", type: "xLIR-motif",
description: "xLIR-motif:PGFEVI", start: 295, end: 300}
},
{
startStyle: "straight", endStyle: "straight",
start: 540, end: 545, text: "xLIR", colour: "#ff00ff",
lineStyle: "bold", v_align: "top", label: "xLIR",
"metadata":{ database: "xLIR web server", type: "xLIR-motif",
description: "xLIR-motif:FSFLDI", start: 540, end: 545}
},
]
}

xLIR motifs are displayed as magenta rectangles in the domain architecture graphic

MOTIF	START	END	LIR sequence	PSSM score	Similar LIRs	In PDB	Anchor
xLIR	96	101	AEWDMV	20 (8.4e-03)	STBD1_HUMAN 201-206 (4)		No
xLIR	295	300	PGFEVI	12 (1.1e-01)			No
xLIR	540	545	FSFLDI	11 (1.5e-01)		[+/-] 3DZX_A 2QFZ_A,B 3DZX_A 2QFZ_A,B 2G77_A 1FKM_A 3QYE_A,B 3HZJ_A,B,C 3QYB_A	No

[+/-] Show/Hide Detailed ANCHOR results

DOMAIN	START	END	STATUS
ANCHOR1	683	691	hidden

[+/-] Show/Hide Detailed SMART results

DOMAIN	START	END	E-VALUE	TYPE	STATUS
Pfam:DUF3548	6	224	5.8e-83	PFAM	visible\|OK
SMART:TBC	343	581	1.6e-50	SMART	visible\|OK
Pfam:TBC	349	578	1.4e-48	PFAM	hidden\|overlap
low_complexity_region	497	509	0	INTRINSIC	hidden\|overlap